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static int | GetTraitID (const char *name) |
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static int | GetMarkerID (const char *name) |
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static int | GetCovariateID (const char *name) |
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static int | GetAffectionID (const char *name) |
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static int | GetStringID (const char *name) |
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static int | LookupTrait (const char *name) |
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static int | LookupMarker (const char *name) |
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static int | LookupCovariate (const char *name) |
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static int | LookupAffection (const char *name) |
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static int | LookupString (const char *name) |
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static void | GrowMarkerInfo () |
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static MarkerInfo * | GetMarkerInfo (String &name) |
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static MarkerInfo * | GetMarkerInfo (int marker) |
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static int | SortMarkersInMapOrder (IntArray &markers, int chromosome=-1) |
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static void | GetOrderedMarkers (IntArray &markers) |
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static void | FlagMissingMarkers (IntArray &missingMarkers) |
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static bool | MarkerPositionsAvailable () |
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static bool | AlleleFrequenciesAvailable () |
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static void | VerifySexSpecificOrder () |
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static void | LoadAlleleFrequencies (const char *filename, bool required=false) |
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static void | LoadAlleleFrequencies (IFILE &file) |
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static void | LoadMarkerMap (const char *filename, bool filter=false) |
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static void | LoadMarkerMap (IFILE &file, bool filter=false) |
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static void | LoadBasepairMap (const char *filename) |
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static void | LoadBasepairMap (IFILE &file) |
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static void | WriteMapFile (const char *filename) |
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static void | WriteMapFile (FILE *file) |
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static void | WriteFreqFile (const char *filename, bool old_format=false) |
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static void | WriteFreqFile (FILE *file, bool old_format=false) |
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static int | LoadAllele (int marker, String &label) |
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static int | LoadAllele (MarkerInfo *info, String &label) |
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Definition at line 107 of file PedigreeGlobals.h.