All Classes

A class to process multiple SR files and their referenced instances (like Images, Presentation States and Segmentations) and build Hierarchical SOP Instance Reference Macros with which to (re-)populate CurrentRequestedProcedureEvidenceSequence.

A class for converting Analyze image input format files into images of a specified or appropriate SOP Class.

Accept only SOP Classes for storage of composite instances and verification SOP Classes with any explicit transfer syntax (whether compressed or not), also rejecting implicit VR transfer syntaxes if an explicit VR transfer syntax is offered for the same abstract syntax.

This class provides a description of the parameters of a known Application Entity.

This class implements a dialog for users to enter DICOM AE network configuration parameters.

A class of static methods for copying data between arrays of different types, expanding arrays, and comparing them, and removing padding from strings.

A factory object of static methods that can accept and initiate associations.

This abstract class provides a mechanism for detecting when an Association closes.

The Attribute class is an abstract class that contains the core functionality for storing, accessing and maintaining values of a DICOM Attribute.

The AttributeList class maintains a list of individual DICOM attributes.

The abstract AttributeListFunctionalGroupsTableModel class extends a AttributeListTableModel to abstract the contents of a list of attributes containing shared and per-frame functional groups for multi-frame objects as a table in order to provide support for a AttributeListTableBrowser.

The abstract AttributeListFunctionalGroupsTableModelOneFrame class extends a AttributeListFunctionalGroupsTableModel to abstract the contents of a list of attributes containing shared and per-frame functional groups for multi-frame objects as a table with a single row for a single frame in order to provide support for a AttributeListTableBrowser.

The AttributeListTableModel class extends a AbstractTableModel to abstract the contents of a list of attributes as a single row table in order to provide support for a AttributeListTableBrowser.

A concrete class specializing Attribute for Attribute Tag (AT) attributes.

The AttributeTreeBrowser class implements a Swing graphical user interface to browse the contents of an AttributeTree.

Various static methods helpful for converting to and from Base64 representations (e.g., for representing binary values in XML documents).

A class that extends FilterOutputStream by adding the concept of little and big endian binary value encoding, and supplies functions for writing various sized integer and floating point words.

Various capability detection methods.

This class is an entire application for displaying and viewing chest x-ray images.

This class represents a concept that has a coded representation.

A concrete class specializing Attribute for Code String (CS) attributes.

A class to encapsulate the attributes of an Item of CodingSchemeIdentificationSequence.

A class to encapsulate color palettes, including serialization and deserialization to and from standard DICOM color palette IODs.

Standard DICOM Hot Metal Blue color palette.

Standard DICOM PET 20 Step color palette.

This class supports anatomic concepts that may be combinations of one another.

A class for representing the attributes of general modules that describe the patient, study, series, instance and related "context" of the payload of a composite DICOM instance.

Accept only SOP Classes for storage of composite instances and verification SOP Classes.

This abstract class provides a mechanism to process each PDU of a composite response as it is received, such as for evaluating the status of the response for success.

This class represents a concept that is uniquely identifiable.

An abstract class for representing a node in an internal representation of a structured reporting tree (an instance of StructuredReport).

An abstract class for representing a node in an internal representation of a structured reporting tree (an instance of StructuredReport).

A class of methods to convert 8 to 16 bit gray scale images.

A class of static methods to convert non-RGB (e.g., YBR_FULL) to RGB true color images.

A class of static methods to convert the planar configuration of a multiple samples per pixel image, i.e., to change color-by-plane to color-by-pixel or vice versa.

A class for copying an entire input stream to an output stream.

This class encapsulates information pertaining to anatomy of CT images.

The DatabaseInformationModel class is an abstract class that contains the core functionality for storing, accessing and maintaining a persistent representation of selected attributes of composite objects.

The DatabaseTreeBrowser class implements a Swing graphical user interface to browse the contents of DatabaseInformationModel.

Instances of the DatabaseTreeRecord class represent nodes in a tree of the DatabaseTreeModel class, which in turn is used by the DatabaseTreeBrowser class.

A concrete class specializing Attribute for Date Time (DT) attributes.

Various static methods helpful for handling dates.

This class copies a set of DICOM files, decompressing them if compressed.

A class to implement bulk de-identification and redaction of DICOM files.

This class provides methods for removing entries from a database, all its children and any associated files that were copied into the database (rather than referenced).

This class describes the graphics environment (number and type and size of displays).

The DicomAndWebStorageServer implements a DICOM storage server with query and retrieval as well as an HTTP server that responds to web requests including WADO as well as an external SQL database access server.

This class is an application for importing or retrieving DICOM studies, cleaning them (i.e., de-identifying them or replacing UIDs, etc.), and sending them elsewhere.

The DicomDictionary class is a complete standard dictionary of DICOM attributes and associated information.

The DicomDictionaryForMinimalPatientStudySeriesInstanceModel class supports a simple DICOM Patient/Study/Series/Concatenation/Instance model.

The DicomDictionaryForStudySeriesInstanceModel class supports a minimal DICOM Study/Series/Instance model.

This class displays images and allows the user to black out burned-in annotation, and save the result.

A class that extends BinaryInputStream by adding the concept of transfer syntaxes, for a (possible) meta information header and a data set.

A class that encapsulates the features and values from a DICOM ECG source, usually for the purpose of displaying it.

A class to copy DICOM attributes from anm input stream to an output stream, converting the encoding of the attributes between transfer syntaxes if necessary.

This class represents anatomic concepts that may be encoded and displayed.

This class represents laterality concepts that may be encoded and displayed.

A set of display shutter parameters constructed from the attributes of the DICOM Display Shutter Module.

This class is an application for retrieving dose information about DICOM studies of patients.

A class to provide various static methods for drawing.

This class is an entire application for displaying and viewing DICOM and SCP ECG waveforms.

A class that extends InputStream by adding a mechanism for unecapsulating an undefined length DICOM attribute, such as is used for compressed Pixel Data.

Use a translet from an XSL-T source file to transform one XML file to another.

A class to abstract the contents of a file meta information header as used for a DICOM PS 3.10 file, with additional static methods to add to and extract from an existing list of attributes.

The FilterPanel class provides a graphical user interface for editing the string values of DICOM attributes in list.

This class copies a set of DICOM files, if they match specified criteria.

A concrete class specializing Attribute for Float Double (FD) attributes.

A concrete class specializing Attribute for Float Single (FL) attributes.

A class to describe a set of frames sharing common characteristics suitable for display or analysis as an entity.

This class provides common support to applications requiring properties related to FTP network services.

This class provides a description of the parameters of a remote FTP host.

This class encapsulates information about remote FTP servers.

A class contain useful methods for manipulating Functional Group Sequences.

A class to extract and describe the spatial geometry of a single cross-sectional image slice, given a list of DICOM attributes.

A class to extract and describe the spatial geometry of an entire volume of contiguous cross-sectional image slices, given a list of DICOM attributes.

A class to represent the study, series and instance identifiers necessary to retrieve a specific single image or frame in a multi-frame image using the hierarchical model.

The HttpServer class is an abstract class that implements a minimal GET method for a web server, primarily as a basis to implement WadoServer.

A class to store Huffman Tables, either as read from an SCP-ECG file or the default as specified in the SCP-ECG standard.

This class implements a panel of icons of DICOM images inside a parent JScrollPane.

A class of utility methods for editing image pixel data.

A class for converting RGB consumer image format input files (anything JIIO can recognize) into DICOM images of a specified SOP Class, or single or multi frame DICOM Secondary Capture images.

A class to provide enumerated constants for the entities of the DICOM Information Model.

A class containing an application for inserting Real World Value Maps from the command line.

A concrete class specializing Attribute for Integer String (IS) attributes.

A class of static methods to copy a DICOM image and retain only enough to describe pixels.

An factory class that provides instances of LocalizerPoster that are used for posting the position of specified slices and volumes on (usually orthogonal) localizer images.

A concrete class specializing Attribute for Long Text (LT) attributes.

A class to categorize DICOM images as having been lossy compressed or not.

A class to extract selected DICOM annotative attributes into defined displayed area relative positions for mammograms.

This class is an entire application for displaying and viewing mammography images and CAD objects.

The MapTableModel class extends a AbstractTableModel to abstract the contents of a database as a tree in order to provide support for a MapTableBrowser.

A class that implements Runnable so that it can be invoked by EventQueue.invokeAndWait().

A class containing an application for merging the patient composite context of multiple instances for consistency.

A class containing an application for merging the functional groups of multiple instances for consistency.

A transformation constructed from a DICOM attribute list that extracts those attributes that define the Modality LUT transformation, specifically the window center and width attributes.

A class that extends OutputStream to track statistics on the transfers.

A class to create a set of instances, which when given unenhanced ("classic") images creates one or more enhanced multiframe image instances from them where possible, otherwise leaves them alone but includes them in the set.

This class implements a multi-modality simulator that takes a database of existing studies to provide a source of sample images and DICOM attributes, and for each modality within the database, generates random new patients and studies at random intervals using the current date and time.

This class encapsulates information about DICOM network devices.

This class provides common support to applications requiring properties related to DICOM network services.

This class provides a dynamic registry of DICOM network parameters possibly federated from various sources.

This class defines a number of useful defaults and constants and utilities to generate defaults.

A class for converting NIfTI-1 image input format files into images of a specified or appropriate SOP Class.

A class that extends OutputStream to discard output.

A concrete class specializing Attribute for Other Byte (OB) attributes.

A concrete class specializing Attribute for Other Byte (OB) attributes whose values are memory or file resident compressed pixel data frames.

A concrete class specializing Attribute for Other Byte (OB) attributes whose values are an array of bytes per frame rather than a single contiguous array containing all frames.

A concrete class specializing Attribute for Other Double (OD) attributes.

A concrete class specializing Attribute for Other Long (OL) attributes.

A concrete class specializing Attribute for Other Word (OW) attributes whose values are not memory resident.

The PatientStudySeriesConcatenationInstanceModel class supports a simple DICOM Patient/Study/Series/Concatenation/Instance model.

A class for to encapsulate JPedal PDF decoding capability if available at runtime without requiring it for compilation.

A class for converting PDF files into a single or multi frame DICOM Secondary Capture image with one frame per page.

A concrete class specializing Attribute for Person Name (PN) attributes.

An class to extract and describe pixel spacing related information.

A factory object of static methods that can create lists of presentation contexts for initiating associations, from lists of DICOM files based on SOP Class (abstract syntax) and supported transfer syntaxes.

This class includes standard and private mechanisms for handling float or double Pixel Data.

This class encapsulates information pertaining to anatomy of projection x-ray images.

This interface abstracts the communication between a query (C-FIND) server that implements the network service, and the source of information with which to respond to the query.

The QueryTreeBrowser class implements a Swing graphical user interface to browse the contents of QueryTreeModel.

Instances of the QueryTreeRecord class represent nodes in a tree of the QueryTreeModel class, which in turn is used by the QueryTreeBrowser class.

A class for converting raw RGB color single frame image input format files (such as from Visible Human) into one or more DICOM multi-frame secondary capture images.

A transformation constructed from a DICOM attribute list that extracts those attributes which describe how stored pixel values are translated into real world values (e.g., Hounsfield Units, cm/s).

This abstract class provides a mechanism to process each PDU as it is received on an association.

This abstract class provides a mechanism for performing processing on a DICOM data set that has been completely received and stored in a file.

A class to read a map of Study, Series, SOP Instance and Frame of Reference UIDs pairs, and then remap occurences in a set of DICOM files to the other member of the pair.

The RequestTypeServer implements an HTTP server that responds to requests of a specified type and dispatches the further handling to a derived class corresponding to the request type.

This interface abstracts the communication between a retrieve (C-MOVE) server that implements the network service, and the source of information with which to respond to the retrieve request.

A class containing an application for rotating and/or flipping a set of images and updating the other attributes accordingly.

A class that implements Runnable so that it can be invoked by EventQueue.invokeLater().

This class represents a concept by a combination of CodingSchemeDesignator and CodeValue.

A class to encapsulate an entire SCP-ECG object.

The SCPTree class implements a TreeModel to abstract the contents of a list of attributes as a tree in order to provide support for a SCPTreeBrowser.

Instances of the SCPTreeRecord class represent nodes in a tree of the SCPTree class, which in turn is used by the SCPTreeBrowser class.

A class to encapsulate the SCP-ECG Pointers to Data Areas section.

A class to encapsulate the SCP-ECG Lead Measurement Results section.

A class to encapsulate the SCP-ECG Lead Definition section.

A class to encapsulate the SCP-ECG Encoded Reference Beat Data and Residual or Rhythm Data sections.

A class to encapsulate the SCP-ECG Textual Diagnosis and Universal Interpretative Statement Codes sections.

A class to provide support for the contents of an individual item of a DICOM Sequence (SQ) attribute, each of which consists of an entire dataset (list of attributes).

A class to describe a set of DICOM files and their features such as SOP Class, Instance and Transfer Syntax UIDs.

A concrete class specializing Attribute for Short String (SH) attributes.

A concrete class specializing Attribute for Signed Long (SL) attributes.

Implements a component that can display a single or multi-frame image in a single panel with window center/width adjustment, scrolling through frames of a multi-frame image, resizing to the size of the panel, annotation of pre-defined text and shapes, feedback of cursor position status (2D and 3D position, pixel value, window).

A class of static methods to provide a means of describing SOP Classes with abbreviations and hman-readable descriptions.

An abstract class that encapsulates the features and values from an ECG source, usually for the purpose of displaying it.

A class to encapsulate the functionality defined by the DICOM Specific Character Set attribute, including the ability to parse the string values of the attribute and then apply the appropriate character conversions from byte array values into Java's internal Unicode representation contained in String.

A class to extract and describe the spatial geometry of an MR spectroscopy localization volume, given a list of DICOM attributes.

This class waits for incoming connections and association requests for the SCP role of SOP Classes of the Storage Service Class, the Study Root Query Retrieve Information Model Find, Get and Move SOP Classes, and the Verification SOP Class.

This class implements the SCU role of SOP Classes of the Storage Service Class.

Store files in a hierarchy of folders using successive numeric components of the SOP Instance UID as the folder name and the SOP Instance UID as the filename within the most deeply nested folder.

Store files in a single folder, using the SOP Instance UID as the filename.

An abstract class specializing Attribute for the family of string attributes that support different specific character sets.

The StructuredReport class implements a TreeModel to abstract the contents of a list of attributes representing a DICOM Structured Report as a tree in order to provide support for a StructuredReportBrowser.

The StructuredReportTreeBrowser class implements a Swing graphical user interface to browse the contents of a StructuredReport.

The StudySeriesInstanceModel class supports a minimal DICOM Study/Series/Instance model.

A class that supports matching the geometry of a superimposed DICOM image and an underlying images, and creating BufferedImages suitable for drawing on an underlying image.

A class that supports matching the geometry of a superimposed image and an underlying images, and creating BufferedImages suitable for drawing on an underlying image.

A class for synchronizing the contents of a local database of DICOM objects with a remote SCP.

A class to private remote logging via the BSD syslog service (UDP on port 514).

This class implements the SCU role of SOP Classes of the Storage Service Class.

An abstract class specializing Attribute for the family of text attributes.

A concrete class specializing Attribute for Time (TM) attributes.

A class to lookup the DICOM Transfer Syntax UID from a string name.

A class to read a set of DICOM files and translate the Image Position (Patient) by a fixed offset.

A class to identify duplicate images based on having the same pixel data hash and constructing collections of their duplicate Study, Series, SOP Instance and Frame of Reference UIDs.

Accept only SOP Classes for storage, query or retrieval of composite instances and verification SOP Classes with uncompressed or deflated or bzip but not encapsulated compressed transfer syntaxes, also rejecting implicit VR transfer syntaxes if an explicit VR transfer syntax is offered for the same abstract syntax.

Accept only uncompressed or deflated or bzip but not encapsulated compressed transfer syntaxes, also rejecting implicit VR transfer syntaxes if an explicit VR transfer syntax is offered for the same abstract syntax.

A concrete class specializing Attribute for Unviversal Resource (UR) attributes.

A concrete class specializing Attribute for Unlimited Characters (UC) attributes.

A concrete class specializing Attribute for Unsigned Short (US) attributes.

A class for creating and convertin UUID based OIDs.

This class implements the SCU role of the Verification SOP Class.

A class of static methods for handling veterinary (animal) data.

A transformation constructed from a DICOM attribute list that extracts those attributes that define the VOI LUT transformation, specifically the window center and width attributes.

The WadoServer implements an HTTP server that responds to WADO GET requests as defined by DICOM PS 3.18 (ISO 17432), which provides a standard web (http) interface through which to retrieve DICOM objects either as DICOM files or as derived JPEG images.

The WebRequest class parses a URL that contains a requestType parameter and additional query parameters.

A class to encode a representation of a DICOM Structured Report object in an XML form, suitable for analysis as human-readable text, or for feeding into an XSLT-based validator.